Class Hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

[detail level 1234]

▼CSubcloneSeeker::Archivable	Abstract class that defines the interface to handle archiving objects into sqlite3 database
CSubcloneSeeker::EventCluster	A collection class that each instance groups many SomaticEvents which share the same cell frequency
▼CSubcloneSeeker::SomaticEvent	Abstract data structure class that represents any type of somatic mutation
▼CSubcloneSeeker::SegmentalMutation	Abstract data structure class that represents any segmental somatic mutation
CSubcloneSeeker::CNV	Copy Number Variation
CSubcloneSeeker::LOH	Loss of Heterozygosity
CSubcloneSeeker::SNP	Single Nucleotide Polymorphism
CSubcloneSeeker::Subclone	The class that represents a subclone in a subclonal structure tree
CCoexistanceTable::ClusterNotFoundError
CCoexistanceTable::ClusterPairAlreadyObservedError
CCoexistanceTable
▼CSubcloneSeeker::GenomicLocation	A point on a reference genome
CSubcloneSeeker::GenomicRange	A segment on a reference genome
CRefGenome	Encapsulates a reference genome
▼CSubcloneSeeker::TreeNode	Base class for any object that can seve as a tree node
CSubcloneSeeker::Subclone	The class that represents a subclone in a subclonal structure tree
▼CSubcloneSeeker::TreeTraverseDelegate	Delegate class handling tree traversing
CCoexistanceTraverseDelegate
CEdgePrintTraverser	A tree traverser that prints the edges in Graphviz .dot format
CNodePrintTraverser	A tree traverser that prints the nodes in Graphviz .dot format
CSubcloneSeeker::SubcloneLoadTreeTraverser	A tree traverser that loads an entire tree structure from a database
CSubcloneSeeker::SubcloneSaveTreeTraverser	A tree traverser that saves an entire tree structure from a database
CTreeMergeTraverseSecondary	Traverse the secondary tree, and try to place every node it encounters onto the primary tree, which was given as a constructor parameter
CTreePrintTraverser	A tree traverser that prints tree in a text format
CTreePrintTraverser	A tree traverser that prints tree in a text format