Class List

Here are the classes, structs, unions and interfaces with brief descriptions:

[detail level 12]

▼NSubcloneSeeker
CArchivable	Abstract class that defines the interface to handle archiving objects into sqlite3 database
CCNV	Copy Number Variation
CEventCluster	A collection class that each instance groups many SomaticEvents which share the same cell frequency
CGenomicLocation	A point on a reference genome
CGenomicRange	A segment on a reference genome
CLOH	Loss of Heterozygosity
CSegmentalMutation	Abstract data structure class that represents any segmental somatic mutation
CSNP	Single Nucleotide Polymorphism
CSomaticEvent	Abstract data structure class that represents any type of somatic mutation
CSubclone	The class that represents a subclone in a subclonal structure tree
CSubcloneLoadTreeTraverser	A tree traverser that loads an entire tree structure from a database
CSubcloneSaveTreeTraverser	A tree traverser that saves an entire tree structure from a database
CTreeNode	Base class for any object that can seve as a tree node
CTreeTraverseDelegate	Delegate class handling tree traversing
▼CCoexistanceTable
CClusterNotFoundError
CClusterPairAlreadyObservedError
CCoexistanceTraverseDelegate
CEdgePrintTraverser	A tree traverser that prints the edges in Graphviz .dot format
CNodePrintTraverser	A tree traverser that prints the nodes in Graphviz .dot format
CRefGenome	Encapsulates a reference genome
CTreeMergeTraverseSecondary	Traverse the secondary tree, and try to place every node it encounters onto the primary tree, which was given as a constructor parameter
CTreePrintTraverser	A tree traverser that prints tree in a text format